IDSL mzML Studio

Platform Instructions

The mzML file format is the basic standard for mass spectrometry data storage and sharing across global data repositories. This software is an advanced, fully client-side tool to rapidly analyze mzML data from high-resolution GC/LC mass spectrometers.

It processes and visualizes MS1 and MS2 data entirely within your browser. The platform enables useful features including Extracted Ion Chromatogram (EIC) multi-targeting, isotopic pattern predictions, and direct cloud-based MS2 spectral similarity searches against the IDSL MS library (containing over 3 million experimental and in-silico spectra).

License @CC BY-NC. Developed and maintained by the Integrated Data Science Laboratory for Metabolomics and Exposomics (IDSL-ME), Icahn School of Medicine at Mount Sinai, New York, USA.

Section 1: Data Source Upload

Click or Drag to Upload

Accepts standard centroided .mzML files

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